MOMD: Mouse Oral Microbiome Database

MOMD Genome Explorer

Selected genome: Bacteroides acidifaciens 8_33DSS_C5_S8

Change genome:

from a total of 52 genomes

Available tools:

Quick search:

(leave empty to show all)

NCBI Genome Annotation:

contigs: 484

bases: 5,219,070 bps

CDS: 4,488

rRNA: 11

tRNA: 69

tmRNA: 1

Total number of protein coding genes annotated/found: 4,263

Display 20 50 100 All items per page

Items 1 - 20

🡆

click arrow to navigate by page or

of 214 pages

Molecule	PID/GenBank ID *^	Sequences	Size (NA/AA) ^	Range ^	Gene Product Name
SEQF5047\|JADGLP010000048.1	MBF0833857.1	NA AA	909/303	154-1062	hypothetical protein
SEQF5047\|JADGLP010000048.1	MBF0833858.1	NA AA	396/132	1181-1576	hypothetical protein
SEQF5047\|JADGLP010000048.1	MBF0833859.1	NA AA	726/242	2504-1779	RDD family protein
SEQF5047\|JADGLP010000048.1	MBF0833860.1	NA AA	963/321	2606-3568	stage II sporulation protein M
SEQF5047\|JADGLP010000048.1	MBF0833861.1	NA AA	939/313	3549-4487	hypothetical protein
SEQF5047\|JADGLP010000048.1	MBF0833862.1	NA AA	618/206	4504-5121	DUF4129 domain-containing protein
SEQF5047\|JADGLP010000048.1	MBF0833863.1	NA AA	1275/425	5118-6392	DUF4350 domain-containing protein
SEQF5047\|JADGLP010000048.1	MBF0833864.1	NA AA	975/325	6404-7378	MoxR family ATPase
SEQF5047\|JADGLP010000048.1	MBF0833865.1	NA AA	1311/437	7443-8753	DUF58 domain-containing protein
SEQF5047\|JADGLP010000048.1	MBF0833866.1	NA AA	228/76	9050-8823	immunity 17 family protein
SEQF5047\|JADGLP010000048.1	MBF0833867.1	NA AA	414/138	9460-9047	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
SEQF5047\|JADGLP010000048.1	MBF0833868.1	NA AA	804/268	10285-9482	metal ABC transporter permease
SEQF5047\|JADGLP010000048.1	MBF0833869.1	NA AA	417/139	10698-10282	phospholipase
SEQF5047\|JADGLP010000048.1	MBF0833870.1	NA AA	1128/376	10802-11929	leucine-rich repeat domain-containing protein
SEQF5047\|JADGLP010000048.1	MBF0833871.1	NA AA	1002/334	11966-12967	M20/M25/M40 family metallo-hydrolase
SEQF5047\|JADGLP010000048.1	MBF0833872.1	NA AA	2013/671	15148-13136	RagB/SusD family nutrient uptake outer membrane protein
SEQF5047\|JADGLP010000048.1	MBF0833873.1	NA AA	717/239	16434-15718	SDR family NAD(P)-dependent oxidoreductase
SEQF5047\|JADGLP010000048.1	MBF0833874.1	NA AA	570/190	17073-16504	Crp/Fnr family transcriptional regulator
SEQF5047\|JADGLP010000048.1	MBF0833875.1	NA AA	1230/410	18316-17087	3-phosphoshikimate 1-carboxyvinyltransferase
SEQF5047\|JADGLP010000148.1	MBF0834680.1	NA AA	166/55	178-343	PTS sugar transporter subunit IIA

Items 1 - 20

🡆

click arrow to navigate by page or

of 214 pages

JBrowse Genome Viewer
* Click GI,UID,Gene Product to go to NCBI record
^ Click column names to toggle sorting

Page last updated: July 7, 2021 08:39:35